Right , for a honeymoon , and for great food , here are some places
Coi , SF legend been and is on the top 50 list . Awesome head chef and great food
Benu , ex headchef of french laundy and per se . broke out of thomas kellers wing / shadow and opend up a amazing place , they got their first star really quick
AQ , a really cool / great / amazing place , while I havent been there its one of the restaurants in the US I would really like to visit and prob work at . very seasonal menu and even the restaurant changes with the seasons
B Patisserie , My friends place , really good sandwiches and even better pasty , its often mentioned of the best places in SF to get a pasty/ or tart or evereything ells , must visit place
if you need more let me know !